(1569-1609)
- Adoration of the Shepherds, The – 1609 (Oil on canvas)
- Alof de Wignancourt, Grand Master of the Knights of Malta (#1, #2) – 1607-08 (Oil on canvas)
- Bacchus – c.1597 (Oil on canvas)
- Basket of Fruit – c.1600-01 (Oil on canvas)
- Boy Bitten by a Lizard – 1596-97 (Oil on canvas)
- Boy with a Basket of Fruit – 1593-94 (Oil on canvas)
- Burial of Sainte Lucy, The – 1608-09 (Oil on canvas)
- Calling of Saint Matthew, The – c.1593 (Oil on canvas)
- Cardsharps, The – c.1594-95 (Oil on canvas)
- Christ on the Mount of Olives – c.1605 (Oil on canvas)
- Conversion of Saint Paul – c.1601 (Oil on canvas)
- Crucifixion of Saint Peter, The – 1600-01 (Oil on canvas)
- David with the Head of Goliath – c.1609-10 (Oil on canvas)
- Death of the Virgin, The – 1605-06 (Oil on canvas)
- Decapitation of Saint John the Baptist – 1607-08 (Oil on canvas)
- Denial of Saint Peter, The – c.1609-10 (Oil on canvas)
- Ecce Homo – c.1604-05 (Oil on canvas)
- Ecstacy of Saint Francis, The – c.1596 (Oil on canvas)
- Entombment, The – 1602-04 (Oil on canvas)
- Fainting Magdalene, The – ???? (Oil on canvas)
- Flagellation, The – 1607 (Oil on canvas)
- Fortune Tellers, The – c.1595 (Oil on canvas)
- Incredulity of Saint Thomas – 1601-02 (Oil on canvas)
- Inspiration of Saint Matthew – 1602 (Oil on canvas)
- Judith Beheading Holofernes – c.1598 (Oil on canvas)
- Jupiter, Neptune, and Pluto – 1597 (Oil on stucco)
- Lute Players, The – 1595-96 (Oil on canvas)
- Madonna of Loreto, The – 1603-04 (Oil on canvas)
- Madonna of the Rosary, The – c.1605-07 (Oil on canvas)
- Madonna of the Snake, The – 1605-06 (Oil on canvas)
- Martyrdom of Saint Matthew – 1599-1600 (Oil on canvas)
- Medusa – 1600-01 (Oil on canvas, mounted on convex poplar-wood shield)
- Musicians, The – 1595-96 (Oil on canvas)
- Penitent Mary Magdalene – c.1596-97 (Oil on canvas)
- Portrait of Monsignor Maffeo Barberini – c.1598-99 (Oil on canvas)
- Portrait of the Courtesan Phyllis – c.1598 (Oil on canvas)
- Rest on the Flight to Egypt – c.1596-97 (Oil on canvas)
- Resurrection of Lazurus, The – 1609 (Oil on canvas)
- Sacrifice of Isaac, The – 1603 (Oil on canvas)
- Saint John the Baptist – c.1605 (Oil on canvas)
- Salome – 1609-10 (Oil on canvas)
- Seven Acts of Mercy, The – 1606 (Oil on canvas)
- Supper at Emmaus – c.1600-01 (Oil on canvas)
- Taking of Christ, The – c.1598-99 (Oil on canvas)
- Victorious Amor – c.1601-02 (Oil on canvas)
- Youth with a Ram – c.1602-03 (Oil on canvas)
- Youthful Bacchus – c.1592 (Oil on canvas)